EnhancerDB
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  3. rs200955842[chr2:96833055]
Enhancers that have rs200955842[chr2:96833055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 96811576 96837215 enh33499
Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Muscle (Myoblast) Pancreas Muscle (Myotube) Thymus Stomach
Transcript factors that have rs200955842[chr2:96833055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 96833044 96833065 IRF1 JASPAR yes 75588386
chr2 96833047 96833061 IRF7 JASPAR yes 75588387
chr2 96833048 96833063 STAT2 JASPAR yes 75588388
chr2 96833049 96833061 IRF1 JASPAR yes 75588389
chr2 96833049 96833064 FOXP1 JASPAR yes 75588390
chr2 96833049 96833070 IRF1 JASPAR yes 75588391
chr2 96833051 96833071 RREB1 JASPAR yes 75588392
chr2 96833054 96833066 IRF1 JASPAR yes 75588393
chr2 96833054 96833069 FOXP1 JASPAR yes 75588394
chr2 96833054 96833075 IRF1 JASPAR yes 75588395
Genes associated with rs200955842[chr2:96833055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More