EnhancerDB
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  3. rs201028624[chr1:41168160]
Enhancers that have rs201028624[chr1:41168160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41162745 41176935 enh274
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs201028624[chr1:41168160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41168148 41168163 SCRT1 JASPAR yes 28336413
chr1 41168152 41168161 SNAI2 JASPAR yes 28336414
chr1 41168152 41168162 FIGLA JASPAR yes 28336415
chr1 41168152 41168162 ID4 JASPAR yes 28336416
chr1 41168152 41168162 TCF3 JASPAR yes 28336417
chr1 41168152 41168162 TCF4 JASPAR yes 28336418
chr1 41168154 41168163 ZEB1 JASPAR yes 28336419
chr1 41168155 41168163 TBX5 JASPAR yes 28336420
Genes associated with rs201028624[chr1:41168160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More