EnhancerDB
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  3. rs201296397[chr9:112956334]
Enhancers that have rs201296397[chr9:112956334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 112949385 112960670 enh25900
Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Lung (A549) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Uterus
Transcript factors that have rs201296397[chr9:112956334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 112956327 112956338 CDX2 JASPAR yes 86236117
chr9 112956327 112956342 FOXP1 JASPAR yes 86236118
chr9 112956328 112956339 HOXA10 JASPAR yes 86236119
chr9 112956329 112956338 CDX1 JASPAR yes 86236120
chr9 112956329 112956339 HOXA13 JASPAR yes 86236121
chr9 112956329 112956339 HOXB13 JASPAR yes 86236122
chr9 112956329 112956339 HOXD13 JASPAR yes 86236123
chr9 112956329 112956344 FOXP1 JASPAR yes 86236124
chr9 112956329 112956350 IRF1 JASPAR yes 86236125
chr9 112956330 112956345 FOXP1 JASPAR yes 86236126
chr9 112956330 112956351 IRF1 JASPAR yes 86236127
chr9 112956331 112956346 FOXP1 JASPAR yes 86236128
chr9 112956331 112956352 IRF1 JASPAR yes 86236129
chr9 112956332 112956347 FOXP1 JASPAR yes 86236130
chr9 112956332 112956353 IRF1 JASPAR yes 86236131
chr9 112956333 112956339 TBP TRANSFAC yes 86236132
chr9 112956333 112956348 FOXP1 JASPAR yes 86236133
chr9 112956333 112956354 IRF1 JASPAR yes 86236134
chr9 112956334 112956349 FOXP1 JASPAR yes 86236135
chr9 112956334 112956355 IRF1 JASPAR yes 86236136
Genes associated with rs201296397[chr9:112956334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More