EnhancerDB
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  3. rs201309335[chr1:235568635]
Enhancers that have rs201309335[chr1:235568635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235558909 235574575 enh12802
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs201309335[chr1:235568635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235568629 235568650 IRF1 JASPAR yes 36367555
chr1 235568631 235568646 PRDM1 JASPAR yes 36367557
chr1 235568631 235568646 STAT2 JASPAR yes 36367558
chr1 235568631 235568652 IRF1 JASPAR yes 36367559
chr1 235568632 235568653 IRF1 JASPAR yes 36367560
chr1 235568633 235568654 IRF1 JASPAR yes 36367561
chr1 235568634 235568649 FOXP1 JASPAR yes 36367562
chr1 235568634 235568655 IRF1 JASPAR yes 36367563
chr1 235568635 235568650 FOXP1 JASPAR yes 36367564
Genes associated with rs201309335[chr1:235568635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More