EnhancerDB
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Enhancers that have rs201624133[chr1:42216668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201624133[chr1:42216668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42216649 42216668 PITX2 TRANSFAC yes 28417321
chr1 42216655 42216668 ZBTB18 JASPAR yes 28417322
chr1 42216656 42216668 PKNOX1 JASPAR yes 28417323
chr1 42216656 42216668 TGIF1 JASPAR yes 28417324
chr1 42216659 42216668 ZEB1 JASPAR yes 28417330
chr1 42216659 42216669 TBX21 JASPAR yes 28417331
chr1 42216659 42216670 TBX2 JASPAR yes 28417332
chr1 42216659 42216672 EOMES JASPAR yes 28417333
chr1 42216660 42216668 MGA JASPAR yes 28417334
chr1 42216660 42216668 TBX15 JASPAR yes 28417335
chr1 42216660 42216668 TBX1 JASPAR yes 28417336
chr1 42216660 42216668 TBX4 JASPAR yes 28417337
chr1 42216660 42216668 TBX5 JASPAR yes 28417338
chr1 42216660 42216670 TBR1 JASPAR yes 28417339
chr1 42216660 42216673 SMAD2 JASPAR yes 28417340
Genes associated with rs201624133[chr1:42216668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More