EnhancerDB
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  3. rs201877476[chr6:40927267]
Enhancers that have rs201877476[chr6:40927267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40922705 40932367 enh38992
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1)
Transcript factors that have rs201877476[chr6:40927267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40927250 40927271 IRF1 JASPAR yes 101623886
chr6 40927256 40927271 MEF2C JASPAR yes 101623887
chr6 40927256 40927277 IRF1 JASPAR yes 101623888
chr6 40927257 40927272 MEF2A JASPAR yes 101623889
chr6 40927258 40927270 MEF2A JASPAR yes 101623890
chr6 40927258 40927270 MEF2B JASPAR yes 101623891
chr6 40927258 40927270 MEF2D JASPAR yes 101623892
chr6 40927259 40927269 MEF2A JASPAR yes 101623893
chr6 40927260 40927275 FOXP1 JASPAR yes 101623894
chr6 40927261 40927282 IRF1 JASPAR yes 101623895
chr6 40927262 40927277 FOXP1 JASPAR yes 101623896
chr6 40927266 40927272 TBP TRANSFAC yes 101623897
Genes associated with rs201877476[chr6:40927267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More