EnhancerDB
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  3. rs2020228[chr17:999960]
Enhancers that have rs2020228[chr17:999960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 996445 1003875 enh16920
Large Intestine Blood (T-cell) Esophagus Stomach Placenta Peripheral Blood (MM.1S) Thymus Epithelial (MCF-7)
Transcript factors that have rs2020228[chr17:999960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 998557 1000130 ZBTB33 GTRD no Lung (A549) 108227944
chr17 998557 1000130 ZBTB33 GTRD no Lung (A549) 108227945
chr17 998557 1000130 ZBTB33 GTRD no Lung (A549) 108227946
chr17 998594 999973 ZNF274 GTRD no Bone Marrow (K562) 108227950
chr17 998594 999973 ZNF274 GTRD no Bone Marrow (K562) 108227951
chr17 998594 999973 ZNF274 GTRD no Bone Marrow (K562) 108227952
chr17 998847 1000006 ZNF143 GTRD no Epithelial (MCF-7) 21739078
chr17 998847 1000006 ZNF143 GTRD no Epithelial (MCF-7) 108227957
chr17 998847 1000006 ZNF143 GTRD no Epithelial (MCF-7) 108227958
chr17 999103 1000059 ZBTB33 GTRD no Lung (A549) 108228007
chr17 999103 1000059 ZBTB33 GTRD no Lung (A549) 108228008
chr17 999942 999963 ZNF263 JASPAR yes 52657113
chr17 999944 999965 ZNF263 JASPAR yes 52657114
chr17 999945 999966 ZNF263 JASPAR yes 52657115
chr17 999951 999961 SP1 JASPAR yes 52657118
chr17 999958 999976 ESR2 JASPAR yes 52657120
Genes associated with rs2020228[chr17:999960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More