EnhancerDB
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  3. rs202024393[chr6:40261537]
Enhancers that have rs202024393[chr6:40261537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40259313 40263809 enh72239
Neural Stem Cells (H9)
Transcript factors that have rs202024393[chr6:40261537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40261530 40261540 ALX3 JASPAR yes 101579818
chr6 40261530 40261540 EMX1 JASPAR yes 101579819
chr6 40261530 40261540 EMX2 JASPAR yes 101579820
chr6 40261530 40261540 EVX2 JASPAR yes 101579821
chr6 40261530 40261540 GSX1 JASPAR yes 101579822
chr6 40261530 40261540 GSX2 JASPAR yes 101579823
chr6 40261530 40261540 HOXA2 JASPAR yes 101579824
chr6 40261530 40261540 HOXB2 JASPAR yes 101579825
chr6 40261530 40261540 HOXB3 JASPAR yes 101579826
chr6 40261530 40261540 MEOX1 JASPAR yes 101579827
chr6 40261530 40261540 MEOX2 JASPAR yes 101579828
chr6 40261530 40261540 NOTO JASPAR yes 101579829
chr6 40261531 40261539 DLX6 JASPAR yes 101579830
chr6 40261531 40261539 EN1 JASPAR yes 101579831
chr6 40261531 40261539 LBX1 JASPAR yes 101579832
chr6 40261531 40261539 PAX4 JASPAR yes 101579833
chr6 40261531 40261539 PDX1 JASPAR yes 101579834
chr6 40261531 40261539 VAX1 JASPAR yes 101579835
chr6 40261531 40261539 VAX2 JASPAR yes 101579836
chr6 40261531 40261539 VSX1 JASPAR yes 101579837
chr6 40261531 40261539 VSX2 JASPAR yes 101579838
chr6 40261531 40261541 POU6F2 JASPAR yes 101579839
Genes associated with rs202024393[chr6:40261537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More