EnhancerDB
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  3. rs202086794[chr12:120449431]
Enhancers that have rs202086794[chr12:120449431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120442165 120460015 enh2631
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Blood (GM12878) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs202086794[chr12:120449431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120449420 120449435 MEF2C JASPAR yes 124144693
chr12 120449421 120449436 MEF2A JASPAR yes 124144695
chr12 120449423 120449437 IRF7 JASPAR yes 124144696
chr12 120449424 120449439 FOXP1 JASPAR yes 124144697
chr12 120449430 120449436 TBP TRANSFAC yes 124144698
Genes associated with rs202086794[chr12:120449431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 120565007 120632513 - GCN1L1 ENSG00000089154.6 120632513 115576 Adrenal 0.189987 12598