EnhancerDB
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  3. rs202160259[chr1:226613490]
Enhancers that have rs202160259[chr1:226613490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226610305 226635295 enh967
Prostate (PC-3) Blood (T-cell) Astrocyte Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen Neural Stem Cells (H9) Thymus
Transcript factors that have rs202160259[chr1:226613490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226613488 226613499 CDX2 JASPAR yes 35814143
chr1 226613489 226613500 HOXA10 JASPAR yes 35814144
chr1 226613489 226613500 HOXC11 JASPAR yes 35814145
chr1 226613489 226613500 HOXC12 JASPAR yes 35814146
chr1 226613489 226613500 HOXC13 JASPAR yes 35814147
chr1 226613489 226613500 HOXD12 JASPAR yes 35814148
chr1 226613490 226613499 CDX1 JASPAR yes 35814149
chr1 226613490 226613500 HOXA13 JASPAR yes 35814150
chr1 226613490 226613500 HOXB13 JASPAR yes 35814151
chr1 226613490 226613500 HOXC10 JASPAR yes 35814152
chr1 226613490 226613500 HOXD11 JASPAR yes 35814153
chr1 226613490 226613500 HOXD13 JASPAR yes 35814154
Genes associated with rs202160259[chr1:226613490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More