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- rs2042725[chr12:108647962]
Enhancers that have rs2042725[chr12:108647962]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
108645416 |
108649595 |
enh51398 |
|
|
Transcript factors that have rs2042725[chr12:108647962]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
108646901
|
108648071
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108056524
|
|
|
chr12
|
108646968
|
108648792
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108056526
|
|
|
chr12
|
108647618
|
108648240
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108056539
|
|
|
chr12
|
108647956
|
108647965
|
HIC2
|
JASPAR
|
yes
|
|
123587483
|
|
|
chr12
|
108647956
|
108647966
|
NFIA
|
JASPAR
|
yes
|
|
123587484
|
|
|
chr12
|
108647956
|
108647972
|
RFX3
|
JASPAR
|
yes
|
|
123587485
|
|
|
chr12
|
108647956
|
108647972
|
RFX4
|
JASPAR
|
yes
|
|
123587486
|
|
|
chr12
|
108647956
|
108647972
|
RFX5
|
JASPAR
|
yes
|
|
123587487
|
|
|
chr12
|
108647957
|
108647966
|
NFIX
|
JASPAR
|
yes
|
|
123587488
|
|
|
chr12
|
108647958
|
108647964
|
NFIC
|
JASPAR
|
yes
|
|
123587489
|
|
|
chr12
|
108647958
|
108647978
|
ESR1
|
JASPAR
|
yes
|
|
123587490
|
|
Genes associated with rs2042725[chr12:108647962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
108126643
|
108155049
|
-
|
PRDM4
|
ENSG00000110851.7
|
108155049
|
492913
|
Lung
|
0.0609912
|
12493
|
|