EnhancerDB
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  3. rs2046518[chr12:54613331]
Enhancers that have rs2046518[chr12:54613331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54604917 54618893 enh2376
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs2046518[chr12:54613331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54613089 54613620 ZNF274 GTRD no Bone Marrow (K562) 21550424
chr12 54613187 54613458 ZNF274 GTRD no Bone Marrow (K562) 21550425
chr12 54613323 54613334 USF1 JASPAR yes 121029639
chr12 54613324 54613334 TFE3 JASPAR yes 121029640
chr12 54613324 54613334 TFEB JASPAR yes 121029641
chr12 54613324 54613334 TFEC JASPAR yes 121029642
chr12 54613324 54613335 USF2 JASPAR yes 121029643
chr12 54613325 54613335 MAX JASPAR yes 121029644
chr12 54613331 54613335 ESR1 TRANSFAC yes 121029645
Genes associated with rs2046518[chr12:54613331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More