EnhancerDB
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Enhancers that have rs2054416[chr18:53432541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 53426705 53437726 enh32712
Prostate (PC-3) Brain (SK-N-SH) Astrocyte Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9)
Transcript factors that have rs2054416[chr18:53432541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 53432526 53432541 FOXP1 JASPAR yes 110795828
chr18 53432527 53432542 FOXA1 JASPAR yes 110795830
chr18 53432529 53432541 FOXI1 JASPAR yes 110795835
chr18 53432532 53432544 FOXC2 JASPAR yes 110795838
chr18 53432533 53432545 FOXI1 JASPAR yes 110795839
chr18 53432534 53432548 ONECUT3 JASPAR yes 110795840
chr18 53432534 53432549 FOXP1 JASPAR yes 110795841
chr18 53432536 53432548 FOXC2 JASPAR yes 110795842
chr18 53432537 53432549 FOXI1 JASPAR yes 110795843
chr18 53432538 53432552 ONECUT2 JASPAR yes 110795844
chr18 53432538 53432552 ONECUT3 JASPAR yes 110795845
chr18 53432538 53432553 FOXP1 JASPAR yes 110795846
chr18 53432538 53432553 HNF1A JASPAR yes 110795847
chr18 53432539 53432553 POU4F1 JASPAR yes 110795848
chr18 53432539 53432554 FOXA1 JASPAR yes 110795849
chr18 53432540 53432551 FOXB1 JASPAR yes 110795850
chr18 53432540 53432551 FOXC1 JASPAR yes 110795851
chr18 53432540 53432551 PROP1 JASPAR yes 110795852
chr18 53432540 53432552 FOXC2 JASPAR yes 110795853
chr18 53432541 53432553 FOXI1 JASPAR yes 110795854
Genes associated with rs2054416[chr18:53432541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More