EnhancerDB
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  3. rs2055955[chr1:42235292]
Enhancers that have rs2055955[chr1:42235292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2055955[chr1:42235292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42235276 42235297 ZNF263 JASPAR yes 28420045
chr1 42235280 42235301 ZNF263 JASPAR yes 28420046
chr1 42235281 42235295 TCF7L2 JASPAR yes 28420048
chr1 42235281 42235296 LEF1 JASPAR yes 28420049
chr1 42235286 42235292 SOX10 JASPAR yes 28420050
chr1 42235288 42235309 ZNF263 JASPAR yes 28420051
chr1 42235289 42235294 ETS2 TRANSFAC yes 28420052
chr1 42235289 42235297 EHF JASPAR yes 28420053
chr1 42235289 42235302 ELF1 JASPAR yes 28420054
chr1 42235292 42235303 FLI1 JASPAR yes 28420055
Genes associated with rs2055955[chr1:42235292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More