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- rs2058201[chr17:49513802]
Enhancers that have rs2058201[chr17:49513802]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
49502285 |
49519023 |
enh48044 |
|
|
Transcript factors that have rs2058201[chr17:49513802]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
49511579
|
49515001
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108272221
|
|
|
chr17
|
49511582
|
49514925
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108272222
|
|
|
chr17
|
49512302
|
49514927
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108272223
|
|
|
chr17
|
49512428
|
49514454
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772176
|
|
|
chr17
|
49512428
|
49514454
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108272226
|
|
|
chr17
|
49512444
|
49514954
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772179
|
|
|
chr17
|
49512444
|
49514954
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108272229
|
|
|
chr17
|
49513181
|
49515070
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772185
|
|
|
chr17
|
49513181
|
49515070
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108272268
|
|
|
chr17
|
49513698
|
49514912
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772186
|
|
|
chr17
|
49513792
|
49513802
|
POU6F2
|
JASPAR
|
yes
|
|
54766783
|
|
|
chr17
|
49513793
|
49513804
|
PHOX2A
|
JASPAR
|
yes
|
|
54766784
|
|
|
chr17
|
49513793
|
49513804
|
PROP1
|
JASPAR
|
yes
|
|
54766785
|
|
|
chr17
|
49513801
|
49513819
|
IRF2
|
JASPAR
|
yes
|
|
54766787
|
|
Genes associated with rs2058201[chr17:49513802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |