EnhancerDB
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  3. rs2077172[chr1:42093340]
Enhancers that have rs2077172[chr1:42093340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs2077172[chr1:42093340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42093331 42093345 STAT1 JASPAR yes 28403198
chr1 42093331 42093346 STAT2 JASPAR yes 28403199
chr1 42093332 42093344 IRF1 JASPAR yes 28403200
Genes associated with rs2077172[chr1:42093340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More