EnhancerDB
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Enhancers that have rs2078371[chr1:115677183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115674129 115687475 enh27085
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs2078371[chr1:115677183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115676068 115681505 ZNF143 GTRD no Epithelial (MCF-7) 21330665
chr1 115676274 115677365 ZNF143 GTRD no Epithelial (MCF-7) 21330666
chr1 115676308 115677292 ZNF143 GTRD no Epithelial (MCF-7) 21330667
chr1 115676330 115677584 P63 GTRD no Skin (Keratinocyte) 21330668
chr1 115676336 115677337 ZNF143 GTRD no Epithelial (MCF-7) 21330669
chr1 115676453 115677482 P63 GTRD no Skin (Keratinocyte) 21330670
chr1 115676643 115677439 P63 GTRD no Skin (Keratinocyte) 21330671
chr1 115676678 115677520 P63 GTRD no Skin (Keratinocyte) 21330672
chr1 115677170 115677185 PRDM1 JASPAR yes 31710326
chr1 115677176 115677194 IRF2 JASPAR yes 31710327
chr1 115677177 115677189 IRF1 JASPAR yes 31710328
chr1 115677179 115677192 SMAD2 JASPAR yes 31710329
Genes associated with rs2078371[chr1:115677183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More