EnhancerDB
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  3. rs2083467[chr1:42219472]
Enhancers that have rs2083467[chr1:42219472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2083467[chr1:42219472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42219468 42219478 TFEB JASPAR yes 28417841
chr1 42219468 42219478 TFEC JASPAR yes 28417842
chr1 42219468 42219479 USF2 JASPAR yes 28417843
chr1 42219471 42219484 SMAD2 JASPAR yes 28417844
Genes associated with rs2083467[chr1:42219472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More