EnhancerDB
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  3. rs2090006[chr1:227410267]
Enhancers that have rs2090006[chr1:227410267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227408965 227417715 enh27589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs2090006[chr1:227410267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227410252 227410269 ESR1 JASPAR yes 35861283
chr1 227410253 227410268 ESR2 JASPAR yes 35861284
chr1 227410255 227410268 EOMES JASPAR yes 35861286
chr1 227410257 227410268 TBX20 JASPAR yes 35861287
chr1 227410258 227410268 TBX21 JASPAR yes 35861288
chr1 227410259 227410267 MGA JASPAR yes 35861289
chr1 227410259 227410267 TBX15 JASPAR yes 35861290
chr1 227410259 227410267 TBX1 JASPAR yes 35861291
chr1 227410259 227410267 TBX4 JASPAR yes 35861292
chr1 227410259 227410267 TBX5 JASPAR yes 35861293
Genes associated with rs2090006[chr1:227410267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More