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- rs2107568[chr17:6557172]
Enhancers that have rs2107568[chr17:6557172]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
6552025 |
6577412 |
enh4228 |
|
|
Transcript factors that have rs2107568[chr17:6557172]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
6554821
|
6557197
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21740839
|
|
|
chr17
|
6554883
|
6557185
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21740840
|
|
|
chr17
|
6554954
|
6557562
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21740841
|
|
|
chr17
|
6555128
|
6557254
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21740842
|
|
|
chr17
|
6555386
|
6557210
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21740845
|
|
Genes associated with rs2107568[chr17:6557172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
6546635
|
6554954
|
-
|
MED31
|
ENSG00000108590.6
|
6554954
|
2218
|
Thyroid
|
2.49261e-13
|
15323
|
|