EnhancerDB
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  3. rs2139455[chr16:89707099]
Enhancers that have rs2139455[chr16:89707099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89705171 89710743 enh52396
Bone Marrow (K562) Prostate (RWPE1) Large Intestine Ovary Colon (HCT116) Pancreas Stomach
Transcript factors that have rs2139455[chr16:89707099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89704504 89713776 TCF7L2 GTRD no Colon (HCT116) 21738779
chr16 89704504 89713776 TCF7L2 GTRD no Colon (HCT116) 21738780
chr16 89704624 89710143 TCF7L2 GTRD no Colon (HCT116) 21738781
chr16 89704854 89713791 TCF7L2 GTRD no Colon (HCT116) 21738782
chr16 89704854 89713791 TCF7L2 GTRD no Colon (HCT116) 21738783
chr16 89705853 89707128 TCF7L2 GTRD no Colon (HCT116) 21738799
chr16 89706050 89709613 TCF7L2 GTRD no Colon (HCT116) 21738816
chr16 89706075 89713067 TCF7L2 GTRD no Colon (HCT116) 21738817
chr16 89706897 89707301 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21738818
chr16 89707087 89707101 GLIS2 JASPAR yes 12354543
chr16 89707093 89707104 NFKB1 JASPAR yes 12354544
chr16 89707096 89707110 PLAG1 JASPAR yes 12354545
chr16 89707097 89707101 H4TF2 TRANSFAC yes 12354546
Genes associated with rs2139455[chr16:89707099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 89642176 89663654 + CPNE7 ENSG00000178773.10 89642176 43445 Esophagus 3.5647e-08 15179
chr16 89679716 89704839 + DPEP1 ENSG00000015413.5 89679716 2260 Adrenal 0.000778545 15180