EnhancerDB
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  3. rs2166274[chr12:54263191]
Enhancers that have rs2166274[chr12:54263191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54259293 54267755 enh43744
Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2166274[chr12:54263191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54261485 54263197 ZNF274 GTRD no Cervix (HeLa-S3) 21550149
chr12 54261491 54263244 ZNF274 GTRD no Cervix (HeLa-S3) 21550151
chr12 54261626 54263213 ZNF274 GTRD no Cervix (HeLa-S3) 21550160
chr12 54261715 54263208 ZNF274 GTRD no Cervix (HeLa-S3) 21550162
chr12 54262317 54263196 ZNF143 GTRD no Epithelial (MCF-7) 21550188
chr12 54263173 54263194 IRF1 JASPAR yes 121015737
chr12 54263176 54263197 ZNF263 JASPAR yes 121015738
chr12 54263180 54263195 FOXP1 JASPAR yes 121015739
chr12 54263181 54263192 FOXP2 JASPAR yes 121015740
chr12 54263181 54263196 STAT2 JASPAR yes 121015741
chr12 54263183 54263191 FOXO3 JASPAR yes 121015742
chr12 54263183 54263194 FOXA1 JASPAR yes 121015743
Genes associated with rs2166274[chr12:54263191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More