EnhancerDB
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  3. rs2172276[chr12:53338041]
Enhancers that have rs2172276[chr12:53338041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53333105 53340015 enh14736
Cervix (HeLa-S3) Brain (SK-N-MC) Muscle (A673) Placenta Stomach
Transcript factors that have rs2172276[chr12:53338041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53337083 53338938 ZNF274 GTRD no Bone Marrow (K562) 108035071
chr12 53337543 53338660 ZNF274 GTRD no Bone Marrow (K562) 108035072
chr12 53337693 53338471 ZNF143 GTRD no Epithelial (MCF-7) 108035073
chr12 53337703 53338564 ZNF143 GTRD no Epithelial (MCF-7) 108035074
chr12 53337746 53338642 ZNF274 GTRD no Bone Marrow (K562) 108035075
chr12 53337757 53338741 ZNF274 GTRD no Bone Marrow (K562) 108035076
chr12 53337875 53338470 ZNF274 GTRD no Bone Marrow (K562) 108035077
chr12 53337885 53338507 ZNF143 GTRD no Epithelial (MCF-7) 108035078
chr12 53337936 53338536 ZNF274 GTRD no Blood (GM12878) 108035079
chr12 53337967 53338507 ZNF274 GTRD no Bone Marrow (K562) 108035080
chr12 53337975 53338559 ZNF274 GTRD no Bone Marrow (K562) 108035081
chr12 53337976 53338495 ZNF274 GTRD no Bone Marrow (K562) 108035082
chr12 53337977 53338556 ZNF274 GTRD no Blood (GM12878) 108035083
chr12 53338001 53339398 ZNF274 GTRD no Bone Marrow (K562) 108035084
chr12 53338001 53339398 ZNF274 GTRD no Bone Marrow (K562) 108035085
chr12 53338018 53338509 ZNF274 GTRD no Bone Marrow (K562) 108035086
chr12 53338032 53338044 HNF1B JASPAR yes 120965311
chr12 53338036 53338048 POU2F1 JASPAR yes 120965312
chr12 53338036 53338049 POU3F3 JASPAR yes 120965313
chr12 53338037 53338048 FOXB1 JASPAR yes 120965314
chr12 53338039 53338044 MYB TRANSFAC yes 120965315
Genes associated with rs2172276[chr12:53338041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More