EnhancerDB
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  3. rs2197620[chr2:29340168]
Enhancers that have rs2197620[chr2:29340168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 29326250 29340371 enh18402
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs2197620[chr2:29340168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 29340156 29340169 POU3F3 JASPAR yes 72690131
chr2 29340164 29340175 FOXC1 JASPAR yes 72690132
chr2 29340164 29340185 IRF1 JASPAR yes 72690133
chr2 29340165 29340169 YY1 TRANSFAC yes 72690134
chr2 29340165 29340186 IRF1 JASPAR yes 72690135
chr2 29340166 29340181 FOXP1 JASPAR yes 72690136
chr2 29340166 29340187 IRF1 JASPAR yes 72690137
Genes associated with rs2197620[chr2:29340168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More