EnhancerDB
  1. Home
  2. SNP
  3. rs2254885[chr1:19978467]
Enhancers that have rs2254885[chr1:19978467]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19973102 19981178 enh11574
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Spleen Thymus Heart
Transcript factors that have rs2254885[chr1:19978467]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19978456 19978470 NR2F1 JASPAR yes 27209113
chr1 19978466 19978475 NKX2-8 JASPAR yes 27209114
chr1 19978466 19978476 NKX2-3 JASPAR yes 27209115
Genes associated with rs2254885[chr1:19978467], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More