EnhancerDB
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  3. rs227752[chr17:54755028]
Enhancers that have rs227752[chr17:54755028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54753045 54762155 enh17235
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Lung (PC-9) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas
Transcript factors that have rs227752[chr17:54755028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54754530 54755096 TCF7L2 GTRD no Colon (HCT116) 21772919
chr17 54754557 54755133 TCF7L2 GTRD no Colon (HCT116) 21772920
chr17 54754595 54755062 TCF7L2 GTRD no Colon (HCT116) 21772921
chr17 54755026 54755031 GATA1 TRANSFAC yes 54902277
Genes associated with rs227752[chr17:54755028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More