EnhancerDB
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Enhancers that have rs2288938[chr19:10340969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs2288938[chr19:10340969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10340513 10340999 ZNF143 GTRD no Epithelial (MCF-7) 21848433
chr19 10340562 10341158 ZNF274 GTRD no Blood (GM12878) 21848434
chr19 10340574 10340974 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848435
chr19 10340583 10341019 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848436
chr19 10340686 10341002 ZNF143 GTRD no Epithelial (MCF-7) 21848437
chr19 10340703 10341354 ZNF274 GTRD no Liver (HepG2) 21848438
chr19 10340739 10340979 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848439
chr19 10340784 10341201 ZNF274 GTRD no Liver (HepG2) 21848440
chr19 10340800 10341176 ZNF274 GTRD no Liver (HepG2) 21848441
chr19 10340834 10341174 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848442
chr19 10340887 10341547 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848443
chr19 10340958 10341338 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848444
chr19 10340969 10341629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848445
Genes associated with rs2288938[chr19:10340969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More