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- rs2339580[chr5:172042998]
Enhancers that have rs2339580[chr5:172042998]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr5 |
172041125 |
172046059 |
enh22810 |
|
|
Transcript factors that have rs2339580[chr5:172042998]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr5
|
172042982
|
172043003
|
IRF1
|
JASPAR
|
yes
|
|
67806860
|
|
|
chr5
|
172042983
|
172042998
|
FOXP1
|
JASPAR
|
yes
|
|
67806861
|
|
|
chr5
|
172042986
|
172043001
|
STAT2
|
JASPAR
|
yes
|
|
67806862
|
|
|
chr5
|
172042988
|
172043009
|
IRF1
|
JASPAR
|
yes
|
|
67806863
|
|
|
chr5
|
172042993
|
172043005
|
IRF1
|
JASPAR
|
yes
|
|
67806864
|
|
Genes associated with rs2339580[chr5:172042998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |