EnhancerDB
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  3. rs2339989[chr5:173146043]
Enhancers that have rs2339989[chr5:173146043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173137866 173150855 enh8884
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs2339989[chr5:173146043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173146033 173146043 TBR1 JASPAR yes 67896743
chr5 173146033 173146044 TBX2 JASPAR yes 67896744
chr5 173146035 173146043 TBX15 JASPAR yes 67896745
chr5 173146035 173146043 TBX1 JASPAR yes 67896746
chr5 173146035 173146043 TBX4 JASPAR yes 67896747
chr5 173146035 173146043 TBX5 JASPAR yes 67896748
chr5 173146035 173146047 PKNOX1 JASPAR yes 67896749
chr5 173146035 173146047 PKNOX2 JASPAR yes 67896750
chr5 173146035 173146047 TGIF1 JASPAR yes 67896751
chr5 173146036 173146046 ID4 JASPAR yes 67896752
chr5 173146038 173146043 USF2 TRANSFAC yes 67896753
Genes associated with rs2339989[chr5:173146043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More