EnhancerDB
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Enhancers that have rs2385543[chr19:2162639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2151719 2162716 enh17847
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Breast Muscle (Myotube)
Transcript factors that have rs2385543[chr19:2162639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2160364 2166031 ZNF274 GTRD no Bone Marrow (K562) 21834743
chr19 2160364 2166031 ZNF274 GTRD no Bone Marrow (K562) 108357890
chr19 2160364 2166031 ZNF274 GTRD no Bone Marrow (K562) 108357891
chr19 2161369 2163064 ZNF274 GTRD no Bone Marrow (K562) 108357892
chr19 2161915 2163512 TCF7L2 GTRD no Colon (HCT116) 21834744
chr19 2161915 2163512 TCF7L2 GTRD no Colon (HCT116) 108357893
chr19 2162143 2162993 TCF7L2 GTRD no Colon (HCT116) 21834745
chr19 2162143 2162993 TCF7L2 GTRD no Colon (HCT116) 108357894
chr19 2162159 2163068 ZNF274 GTRD no Bone Marrow (K562) 108357895
chr19 2162179 2162956 ZNF274 GTRD no Bone Marrow (K562) 108357896
chr19 2162233 2164129 ZNF274 GTRD no Cervix (HeLa-S3) 21834746
chr19 2162233 2164129 ZNF274 GTRD no Cervix (HeLa-S3) 108357897
chr19 2162239 2162758 ZNF274 GTRD no Bone Marrow (K562) 108357898
chr19 2162267 2162845 ZNF274 GTRD no Bone Marrow (K562) 108357899
chr19 2162268 2163066 ZNF143 GTRD no Epithelial (MCF-7) 108357900
chr19 2162303 2164815 TCF7L2 GTRD no Colon (HCT116) 21834747
chr19 2162303 2164815 TCF7L2 GTRD no Colon (HCT116) 108357901
chr19 2162309 2163044 ZNF274 GTRD no Bone Marrow (K562) 108357902
chr19 2162312 2162993 ZNF274 GTRD no Bone Marrow (K562) 108357903
chr19 2162320 2163069 ZNF274 GTRD no Bone Marrow (K562) 108357904
chr19 2162331 2163066 ZNF143 GTRD no Epithelial (MCF-7) 108357905
chr19 2162335 2164101 ZNF274 GTRD no Bone Marrow (K562) 108357906
chr19 2162352 2163061 ZNF143 GTRD no Epithelial (MCF-7) 108357907
chr19 2162355 2163089 ZNF274 GTRD no Blood (GM12878) 108357908
chr19 2162362 2163050 ZNF274 GTRD no Bone Marrow (K562) 108357909
chr19 2162382 2163071 ZBTB33 GTRD no Lung (A549) 108357910
chr19 2162386 2162872 ZNF274 GTRD no Blood (GM12878) 108357911
chr19 2162414 2163776 TCF7L2 GTRD no Colon (HCT116) 21834748
chr19 2162414 2163776 TCF7L2 GTRD no Colon (HCT116) 108357912
chr19 2162417 2163057 ZBTB33 GTRD no Lung (A549) 108357913
chr19 2162419 2163113 TCF7L2 GTRD no Colon (HCT116) 21834749
chr19 2162419 2163113 TCF7L2 GTRD no Colon (HCT116) 108357914
chr19 2162438 2162980 ZNF274 GTRD no Blood (GM12878) 108357915
chr19 2162443 2163096 ZNF143 GTRD no Epithelial (MCF-7) 108357916
chr19 2162468 2164792 TCF7L2 GTRD no Colon (HCT116) 21834750
chr19 2162468 2164792 TCF7L2 GTRD no Colon (HCT116) 108357917
chr19 2162476 2163060 ZNF274 GTRD no Blood (GM12878) 108357918
chr19 2162489 2162774 ZNF274 GTRD no Blood (GM12878) 108357919
chr19 2162499 2162966 ZBTB33 GTRD no Lung (A549) 108357920
chr19 2162502 2163098 ZNF274 GTRD no Bone Marrow (K562) 108357921
chr19 2162510 2164335 ZBTB33 GTRD no Lung (A549) 108357922
chr19 2162540 2162894 ZNF143 GTRD no Epithelial (MCF-7) 108357923
chr19 2162553 2163003 ZBTB33 GTRD no Lung (A549) 108357924
chr19 2162555 2163077 ZNF274 GTRD no Cervix (HeLa-S3) 21834751
chr19 2162555 2163077 ZNF274 GTRD no Cervix (HeLa-S3) 108357925
chr19 2162561 2162957 ZNF274 GTRD no Bone Marrow (K562) 108357926
chr19 2162564 2162964 ZNF143 GTRD no Epithelial (MCF-7) 108357927
chr19 2162569 2163063 ZNF274 GTRD no Blood (GM12878) 108357928
chr19 2162583 2163023 ZNF274 GTRD no Bone Marrow (K562) 108357929
chr19 2162589 2162886 ZNF274 GTRD no Blood (GM12878) 108357930
chr19 2162592 2162996 ZNF274 GTRD no Bone Marrow (K562) 108357931
chr19 2162594 2163016 ZNF143 GTRD no Epithelial (MCF-7) 108357932
chr19 2162602 2163017 ZNF274 GTRD no Bone Marrow (K562) 108357933
chr19 2162607 2162996 ZBTB33 GTRD no Lung (A549) 108357934
chr19 2162617 2163019 ZNF274 GTRD no Blood (GM12878) 108357935
chr19 2162624 2162994 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108357936
chr19 2162633 2162652 PAX5 JASPAR yes 112052656
chr19 2162638 2163110 ZNF274 GTRD no Blood (GM12878) 108357937
Genes associated with rs2385543[chr19:2162639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More