EnhancerDB
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  3. rs2412322[chr17:48578726]
Enhancers that have rs2412322[chr17:48578726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48569165 48580715 enh86256
Stomach Colon (HCT116) Cervix (HeLa-S3) Lung (PC-9)
Transcript factors that have rs2412322[chr17:48578726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48576495 48579169 TCF7L2 GTRD no Colon (HCT116) 21769802
chr17 48576537 48579317 TCF7L2 GTRD no Colon (HCT116) 21769803
chr17 48577511 48579226 TCF7L2 GTRD no Colon (HCT116) 21769806
chr17 48577572 48579178 TCF7L2 GTRD no Colon (HCT116) 21769810
chr17 48577650 48579059 TCF7L2 GTRD no Colon (HCT116) 21769811
chr17 48577679 48579129 TCF7L2 GTRD no Colon (HCT116) 21769812
chr17 48578480 48578730 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21769818
chr17 48578483 48578773 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21769819
chr17 48578501 48578761 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21769821
chr17 48578557 48579105 TCF7L2 GTRD no Colon (HCT116) 21769822
chr17 48578592 48581062 TCF7L2 GTRD no Colon (HCT116) 21769823
chr17 48578723 48578729 ATF1 TRANSFAC yes 54706519
Genes associated with rs2412322[chr17:48578726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48585745 48608862 + MYCBPAP ENSG00000136449.9 48585745 7019 Thyroid 1.46424e-19 16038