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- rs2435234[chr1:199654673]
Enhancers that have rs2435234[chr1:199654673]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
199645985 |
199663121 |
enh27409 |
|
|
Transcript factors that have rs2435234[chr1:199654673]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
199654418
|
199654922
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362369
|
|
|
chr1
|
199654441
|
199654917
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362370
|
|
|
chr1
|
199654513
|
199654773
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362371
|
|
|
chr1
|
199654517
|
199654887
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362372
|
|
|
chr1
|
199654519
|
199654863
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362373
|
|
|
chr1
|
199654534
|
199654918
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362374
|
|
|
chr1
|
199654535
|
199654865
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362375
|
|
|
chr1
|
199654556
|
199654896
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362376
|
|
|
chr1
|
199654559
|
199654889
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362377
|
|
|
chr1
|
199654584
|
199654817
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21362378
|
|
|
chr1
|
199654588
|
199654844
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362379
|
|
|
chr1
|
199654591
|
199654855
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362380
|
|
|
chr1
|
199654603
|
199654833
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362381
|
|
|
chr1
|
199654663
|
199654677
|
TCF7L2
|
JASPAR
|
yes
|
|
34391019
|
|
|
chr1
|
199654663
|
199654678
|
LEF1
|
JASPAR
|
yes
|
|
34391020
|
|
|
chr1
|
199654664
|
199654682
|
RARA
|
JASPAR
|
yes
|
|
34391021
|
|
|
chr1
|
199654667
|
199654673
|
TCF1
|
TRANSFAC
|
yes
|
|
34391022
|
|
|
chr1
|
199654670
|
199654680
|
TBX21
|
JASPAR
|
yes
|
|
34391023
|
|
|
chr1
|
199654670
|
199654681
|
TBX2
|
JASPAR
|
yes
|
|
34391024
|
|
|
chr1
|
199654670
|
199654683
|
EOMES
|
JASPAR
|
yes
|
|
34391025
|
|
|
chr1
|
199654671
|
199654681
|
TBR1
|
JASPAR
|
yes
|
|
34391026
|
|
|
chr1
|
199654672
|
199654797
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21362382
|
|
Genes associated with rs2435234[chr1:199654673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |