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- rs2477685[chr1:2506359]
Enhancers that have rs2477685[chr1:2506359]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
2505345 |
2512455 |
enh11428 |
|
|
Transcript factors that have rs2477685[chr1:2506359]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
2500907
|
2508589
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801830
|
|
|
chr1
|
2500907
|
2508589
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801831
|
|
|
chr1
|
2506346
|
2506361
|
MYBL2
|
JASPAR
|
yes
|
|
26244729
|
|
|
chr1
|
2506355
|
2506365
|
GSC2
|
JASPAR
|
yes
|
|
26244731
|
|
|
chr1
|
2506355
|
2506365
|
GSC
|
JASPAR
|
yes
|
|
26244732
|
|
|
chr1
|
2506356
|
2506364
|
OTX1
|
JASPAR
|
yes
|
|
26244733
|
|
|
chr1
|
2506356
|
2506364
|
OTX2
|
JASPAR
|
yes
|
|
26244734
|
|
|
chr1
|
2506356
|
2506365
|
PITX3
|
JASPAR
|
yes
|
|
26244735
|
|
Genes associated with rs2477685[chr1:2506359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
2323267
|
2336883
|
+
|
RER1
|
ENSG00000157916.14
|
2323267
|
169476
|
Stomach
|
0.0766312
|
64
|
|