EnhancerDB
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  3. rs2501407[chr1:24225630]
Enhancers that have rs2501407[chr1:24225630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24220965 24239635 enh130
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus Stomach
Transcript factors that have rs2501407[chr1:24225630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24225619 24225632 SMAD2 JASPAR yes 27463893
chr1 24225626 24225647 IRF1 JASPAR yes 27463895
chr1 24225629 24225633 NFE TRANSFAC yes 27463896
chr1 24225630 24225644 IRF8 JASPAR yes 27463897
Genes associated with rs2501407[chr1:24225630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More