EnhancerDB
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  3. rs2524008[chr6:29897544]
Enhancers that have rs2524008[chr6:29897544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29890543 29897615 enh9027
Cervix (HeLa-S3) Bone (Osteoblast) Colon (HCT116) Blood (Karpas-422) Pancreas (Panc1) Uterus
Transcript factors that have rs2524008[chr6:29897544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29897531 29897549 RARA JASPAR yes 101016254
chr6 29897532 29897546 RXRG JASPAR yes 101016255
chr6 29897540 29897557 RARA JASPAR yes 101016256
chr6 29897542 29897552 ALX3 JASPAR yes 101016257
chr6 29897542 29897552 ESX1 JASPAR yes 101016258
chr6 29897542 29897552 GSX2 JASPAR yes 101016259
chr6 29897542 29897552 HESX1 JASPAR yes 101016260
chr6 29897542 29897552 LHX6 JASPAR yes 101016261
chr6 29897542 29897552 MIXL1 JASPAR yes 101016262
chr6 29897542 29897552 MNX1 JASPAR yes 101016263
chr6 29897542 29897552 NOTO JASPAR yes 101016264
chr6 29897542 29897552 RAX JASPAR yes 101016265
chr6 29897543 29897551 ISX JASPAR yes 101016266
chr6 29897543 29897551 LMX1A JASPAR yes 101016267
chr6 29897543 29897551 LMX1B JASPAR yes 101016268
chr6 29897543 29897551 NKX6-1 JASPAR yes 101016269
chr6 29897543 29897551 NKX6-2 JASPAR yes 101016270
chr6 29897543 29897551 PRRX1 JASPAR yes 101016271
chr6 29897543 29897551 RAX2 JASPAR yes 101016272
chr6 29897543 29897551 SHOX JASPAR yes 101016273
chr6 29897543 29897551 UNCX JASPAR yes 101016274
chr6 29897543 29897551 VAX1 JASPAR yes 101016275
Genes associated with rs2524008[chr6:29897544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More