EnhancerDB
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Enhancers that have rs2532340[chr17:44345653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 44337785 44347097 enh32212
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell)
Transcript factors that have rs2532340[chr17:44345653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 44344034 44346688 ZBTB33 GTRD no Lung (A549) 108265903
chr17 44344247 44349448 ZNF274 GTRD no Blood (GM12878) 108265941
chr17 44344290 44346850 ZNF143 GTRD no Epithelial (MCF-7) 108265951
chr17 44344711 44346382 ZNF274 GTRD no Cervix (HeLa-S3) 21765704
chr17 44344721 44346372 ZNF274 GTRD no Cervix (HeLa-S3) 21765705
chr17 44344762 44346764 ZNF274 GTRD no Cervix (HeLa-S3) 21765706
chr17 44344835 44346255 ZNF274 GTRD no Cervix (HeLa-S3) 21765709
chr17 44344863 44346173 ZNF274 GTRD no Cervix (HeLa-S3) 21765713
chr17 44344866 44346565 ZNF274 GTRD no Cervix (HeLa-S3) 21765714
chr17 44344890 44346876 ZNF274 GTRD no Cervix (HeLa-S3) 21765716
chr17 44345255 44346811 ZNF274 GTRD no Cervix (HeLa-S3) 21765724
chr17 44345562 44346569 ZNF274 GTRD no Cervix (HeLa-S3) 21765725
chr17 44345574 44346144 ZNF274 GTRD no Cervix (HeLa-S3) 21765726
chr17 44345629 44346344 ZNF274 GTRD no Cervix (HeLa-S3) 21765727
chr17 44345649 44346195 ZNF274 GTRD no Cervix (HeLa-S3) 21765728
chr17 44345651 44345661 GSC2 JASPAR yes 54493709
chr17 44345652 44345660 OTX1 JASPAR yes 54493710
chr17 44345652 44345660 OTX2 JASPAR yes 54493711
Genes associated with rs2532340[chr17:44345653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More