EnhancerDB
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  3. rs2544666[chr5:86414258]
Enhancers that have rs2544666[chr5:86414258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 86407105 86421035 enh22410
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus
Transcript factors that have rs2544666[chr5:86414258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 86414254 86414259 SP1 TRANSFAC yes 63981775
chr5 86414255 86414260 SP1 TRANSFAC yes 63981776
chr5 86414255 86414264 THAP1 JASPAR yes 63981777
chr5 86414258 86414262 LFA1 TRANSFAC yes 63981778
Genes associated with rs2544666[chr5:86414258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More