EnhancerDB
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  3. rs2546542[chr5:172190696]
Enhancers that have rs2546542[chr5:172190696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs2546542[chr5:172190696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172190692 172190701 TFAP2A JASPAR yes 67823951
Genes associated with rs2546542[chr5:172190696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More