EnhancerDB
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  3. rs260271[chr6:42306422]
Enhancers that have rs260271[chr6:42306422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42303168 42310151 enh38999
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus
chr6 42306418 42306926 vista51964
VISTA
Transcript factors that have rs260271[chr6:42306422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42306059 42306845 TCF7L2 UCSC Txn Factor no Conserved 108540244
chr6 42306412 42306422 HOXC10 JASPAR yes 70364769
chr6 42306412 42306422 HOXD11 JASPAR yes 70364770
chr6 42306412 42306422 HOXC10 JASPAR yes 101710092
chr6 42306412 42306422 HOXD11 JASPAR yes 101710093
chr6 42306412 42306423 HOXC11 JASPAR yes 70364771
chr6 42306412 42306423 HOXD12 JASPAR yes 70364772
chr6 42306412 42306423 HOXC11 JASPAR yes 101710094
chr6 42306412 42306423 HOXD12 JASPAR yes 101710095
chr6 42306413 42306422 CDX1 JASPAR yes 70364773
chr6 42306413 42306422 CDX1 JASPAR yes 101710096
Genes associated with rs260271[chr6:42306422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More