EnhancerDB
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Enhancers that have rs2602728[chr19:5046318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5042775 5071015 enh4976
Brain (SK-N-SH) Prostate (RWPE1) Bone (Osteoblast) Muscle (A673) Thyroid Blood (Karpas-422) Uterus Heart
Transcript factors that have rs2602728[chr19:5046318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5045713 5047134 ZNF143 GTRD no Epithelial (MCF-7) 108374169
chr19 5045727 5047171 ZNF143 GTRD no Epithelial (MCF-7) 108374170
chr19 5045737 5047099 AR GTRD no Prostate (PC-3) 108374171
chr19 5045794 5047312 ZNF274 GTRD no Cervix (HeLa-S3) 108374172
chr19 5045841 5047052 ZNF143 GTRD no Epithelial (MCF-7) 108374173
chr19 5045855 5047326 ZBTB33 GTRD no Lung (A549) 108374174
chr19 5045887 5047328 ZNF143 GTRD no Epithelial (MCF-7) 108374175
chr19 5045888 5046954 ZNF143 GTRD no Epithelial (MCF-7) 108374176
chr19 5045890 5047178 ZNF143 GTRD no Epithelial (MCF-7) 108374177
chr19 5045907 5047325 ZBTB33 GTRD no Lung (A549) 108374178
chr19 5045949 5047012 ZNF143 GTRD no Epithelial (MCF-7) 108374179
chr19 5045950 5047104 ZNF143 GTRD no Epithelial (MCF-7) 108374180
chr19 5045959 5047383 ZBTB33 GTRD no Lung (A549) 108374181
chr19 5045969 5047323 ZBTB33 GTRD no Lung (A549) 108374182
chr19 5045974 5047191 ZNF143 GTRD no Epithelial (MCF-7) 108374183
chr19 5045987 5046595 TCF7L2 GTRD no Colon (HCT116) 108374184
chr19 5045988 5047156 ZBTB33 GTRD no Lung (A549) 108374185
chr19 5046002 5046896 ZNF143 GTRD no Epithelial (MCF-7) 108374186
chr19 5046004 5047112 ZNF143 GTRD no Epithelial (MCF-7) 108374187
chr19 5046006 5046659 ZNF143 GTRD no Epithelial (MCF-7) 108374188
chr19 5046014 5047061 ZNF143 GTRD no Epithelial (MCF-7) 108374189
chr19 5046017 5047127 ZBTB33 GTRD no Lung (A549) 108374190
chr19 5046022 5047179 ZNF143 GTRD no Epithelial (MCF-7) 108374191
chr19 5046026 5046694 TCF7L2 GTRD no Colon (HCT116) 108374192
chr19 5046033 5047100 ZNF143 GTRD no Epithelial (MCF-7) 108374193
chr19 5046039 5046678 ZNF143 GTRD no Epithelial (MCF-7) 108374194
chr19 5046045 5047236 ZNF143 GTRD no Epithelial (MCF-7) 108374195
chr19 5046061 5047201 ZNF143 GTRD no Epithelial (MCF-7) 108374196
chr19 5046062 5047040 ZNF143 GTRD no Epithelial (MCF-7) 108374197
chr19 5046063 5047208 ZNF143 GTRD no Epithelial (MCF-7) 108374198
chr19 5046065 5047110 ZBTB33 GTRD no Lung (A549) 108374199
chr19 5046067 5046676 TCF7L2 GTRD no Colon (HCT116) 108374200
chr19 5046077 5046617 ZNF274 GTRD no Bone Marrow (K562) 108374201
chr19 5046082 5047101 ZNF143 GTRD no Epithelial (MCF-7) 108374202
chr19 5046090 5046790 ZNF143 GTRD no Epithelial (MCF-7) 108374203
chr19 5046090 5047119 ZBTB33 GTRD no Lung (A549) 108374204
chr19 5046094 5047106 ZBTB33 GTRD no Lung (A549) 108374205
chr19 5046113 5046969 ZBTB33 GTRD no Lung (A549) 108374206
chr19 5046123 5046813 MYOD GTRD no Muscle (Myoblast) 108374207
chr19 5046144 5047237 ZNF143 GTRD no Epithelial (MCF-7) 108374208
chr19 5046147 5047195 ZNF143 GTRD no Epithelial (MCF-7) 108374209
chr19 5046173 5046922 ZBTB33 GTRD no Lung (A549) 108374210
chr19 5046190 5047304 ZNF274 GTRD no Cervix (HeLa-S3) 108374211
chr19 5046191 5047198 ZNF143 GTRD no Epithelial (MCF-7) 108374212
chr19 5046192 5047193 ZNF274 GTRD no Cervix (HeLa-S3) 108374213
chr19 5046194 5047314 ZBTB33 GTRD no Lung (A549) 108374214
chr19 5046195 5046816 ZNF143 GTRD no Epithelial (MCF-7) 108374215
chr19 5046207 5046703 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108374216
chr19 5046214 5047105 ZBTB33 GTRD no Lung (A549) 108374217
chr19 5046230 5046844 ZNF143 GTRD no Epithelial (MCF-7) 108374218
chr19 5046259 5047220 ZNF274 GTRD no Liver (HepG2) 108374219
chr19 5046272 5046848 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108374220
chr19 5046275 5046807 ZNF274 GTRD no Liver (HepG2) 108374221
chr19 5046278 5046929 ZNF274 GTRD no Liver (HepG2) 108374222
chr19 5046290 5046915 ZNF274 GTRD no Liver (HepG2) 108374223
chr19 5046300 5046817 SOX2 GTRD no Neural Stem Cells (H9) 108374224
chr19 5046304 5046990 ZNF143 GTRD no Epithelial (MCF-7) 108374225
chr19 5046309 5046812 ZBTB33 GTRD no Lung (A549) 108374226
chr19 5046317 5046965 ZBTB33 GTRD no Lung (A549) 108374227
chr19 5046317 5047088 ZNF274 GTRD no Cervix (HeLa-S3) 108374228
Genes associated with rs2602728[chr19:5046318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More