EnhancerDB
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  3. rs2644120[chr1:201882277]
Enhancers that have rs2644120[chr1:201882277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201879005 201889035 enh12530
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs2644120[chr1:201882277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201879927 201884764 ZNF274 GTRD no Blood (GM12878) 107857150
chr1 201879954 201886120 ZBTB33 GTRD no Lung (A549) 107857151
chr1 201881372 201884972 ZNF274 GTRD no Bone Marrow (K562) 107857152
chr1 201881673 201889087 ZNF274 GTRD no Bone Marrow (K562) 107857153
chr1 201882264 201882279 SOX21 JASPAR yes 34536944
chr1 201882268 201882278 HOXA13 JASPAR yes 34536946
chr1 201882268 201882278 HOXB13 JASPAR yes 34536947
chr1 201882268 201882278 HOXD13 JASPAR yes 34536948
chr1 201882268 201882279 HOXA10 JASPAR yes 34536949
chr1 201882269 201882278 CDX1 JASPAR yes 34536950
chr1 201882269 201882280 CDX2 JASPAR yes 34536951
Genes associated with rs2644120[chr1:201882277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More