EnhancerDB
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  3. rs2647180[chr1:17451275]
Enhancers that have rs2647180[chr1:17451275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17446485 17458935 enh11552
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs2647180[chr1:17451275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17451264 17451278 GLIS2 JASPAR yes 27070056
chr1 17451264 17451278 ZIC1 JASPAR yes 27070057
chr1 17451264 17451279 ZIC3 JASPAR yes 27070058
chr1 17451264 17451279 ZIC4 JASPAR yes 27070059
Genes associated with rs2647180[chr1:17451275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More