EnhancerDB
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  3. rs2773090[chr1:178657403]
Enhancers that have rs2773090[chr1:178657403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs2773090[chr1:178657403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178657397 178657409 PKNOX1 JASPAR yes 33438872
chr1 178657397 178657409 PKNOX2 JASPAR yes 33438873
chr1 178657397 178657409 TGIF1 JASPAR yes 33438874
chr1 178657398 178657408 CLOCK JASPAR yes 33438875
chr1 178657399 178657409 MAX JASPAR yes 33438876
chr1 178657402 178657413 FOXH1 JASPAR yes 33438877
Genes associated with rs2773090[chr1:178657403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More