EnhancerDB
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  3. rs2790113[chr1:200308487]
Enhancers that have rs2790113[chr1:200308487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2790113[chr1:200308487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200308297 200308767 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21363142
chr1 200308473 200308488 FOXA1 JASPAR yes 34436652
chr1 200308480 200308495 SOX21 JASPAR yes 34436653
chr1 200308486 200308494 DLX6 JASPAR yes 34436654
chr1 200308486 200308494 MSX1 JASPAR yes 34436655
Genes associated with rs2790113[chr1:200308487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More