EnhancerDB
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  3. rs2790120[chr1:200298814]
Enhancers that have rs2790120[chr1:200298814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2790120[chr1:200298814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200298806 200298819 NFKB1 JASPAR yes 34435036
chr1 200298813 200298827 PLAG1 JASPAR yes 34435037
chr1 200298814 200298820 SP1 TRANSFAC yes 34435038
Genes associated with rs2790120[chr1:200298814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More