EnhancerDB
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  3. rs2798306[chr1:117023609]
Enhancers that have rs2798306[chr1:117023609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2798306[chr1:117023609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117022705 117024174 ZNF274 GTRD no Blood (GM12878) 21332919
chr1 117022956 117024301 ZNF274 GTRD no Blood (GM12878) 21332920
chr1 117022979 117024336 ZNF274 GTRD no Blood (GM12878) 21332921
chr1 117023442 117024139 ZNF274 GTRD no Blood (GM12878) 21332924
chr1 117023504 117024152 ZNF274 GTRD no Blood (GM12878) 21332925
chr1 117023586 117024062 ZNF274 GTRD no Blood (GM12878) 21332926
chr1 117023588 117024051 ZNF274 GTRD no Blood (GM12878) 21332927
chr1 117023592 117024048 ZNF274 GTRD no Blood (GM12878) 21332928
chr1 117023600 117023921 ZNF274 GTRD no Blood (GM12878) 21332929
chr1 117023600 117024065 ZNF274 GTRD no Blood (GM12878) 21332930
chr1 117023605 117024027 ZNF274 GTRD no Blood (GM12878) 21332931
chr1 117023606 117023615 POU3F4 JASPAR yes 31811673
chr1 117023609 117024083 ZNF274 GTRD no Blood (GM12878) 21332932
Genes associated with rs2798306[chr1:117023609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More