EnhancerDB
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  3. rs2808476[chr1:200298150]
Enhancers that have rs2808476[chr1:200298150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2808476[chr1:200298150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200298137 200298150 NFKB1 JASPAR yes 34434939
chr1 200298137 200298150 NFKB2 JASPAR yes 34434940
chr1 200298141 200298200 ZNF274 GTRD no Liver (HepG2) 21363026
Genes associated with rs2808476[chr1:200298150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More