EnhancerDB
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  3. rs28398052[chr2:72340733]
Enhancers that have rs28398052[chr2:72340733]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 72333168 72345515 enh18670
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Breast Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs28398052[chr2:72340733]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 72340727 72340741 ZIC1 JASPAR yes 74992777
chr2 72340727 72340742 ZIC3 JASPAR yes 74992778
chr2 72340727 72340742 ZIC4 JASPAR yes 74992779
Genes associated with rs28398052[chr2:72340733], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More