EnhancerDB
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  3. rs28405261[chr5:172878992]
Enhancers that have rs28405261[chr5:172878992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172875285 172888095 enh22823
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Heart
Transcript factors that have rs28405261[chr5:172878992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172878985 172879000 SOX21 JASPAR yes 67872339
chr5 172878986 172878998 TEAD1 JASPAR yes 67872340
chr5 172878992 172879013 IRF1 JASPAR yes 67872341
Genes associated with rs28405261[chr5:172878992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More