EnhancerDB
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  3. rs28427152[chr1:42248246]
Enhancers that have rs28427152[chr1:42248246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28427152[chr1:42248246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42248235 42248250 MEF2C JASPAR yes 28422011
chr1 42248236 42248251 MEF2A JASPAR yes 28422012
chr1 42248237 42248249 MEF2A JASPAR yes 28422013
chr1 42248237 42248249 MEF2B JASPAR yes 28422014
chr1 42248237 42248249 MEF2D JASPAR yes 28422015
Genes associated with rs28427152[chr1:42248246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More